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PROTEIN
Polymorphic Metaproteome
88
Polymorphic Metaproteome — Search & Discovery
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Organisms
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Restrict to a branch of the tree of life.
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Keep at most N organisms per group at the chosen level.
Activity & Function
ⓘ
Enzyme Classification (EC)
Hydrolases
break
bond
w/ water
(15)
Transferases
transport
groups
(11)
Isomerases
rearrange
structure
(7)
Ligases
join
molecules
(3)
Oxidoreductases
electron
transfer
(2)
Lyases
break
bond
w/o water
(2)
Catalytic Activity
Hydrolase
cleave
H₂O
(15)
Transferase
transfer
(13)
Oxidoreductase
redox
(3)
Kinase
phospho
(2)
Ligase
join
ATP
(2)
Protease
cleave
peptide
(4)
Isomerase
rearrange
(7)
Lyase
cleave
(2)
Methyltransferase
CH₃
epigenetic
(4)
Nuclease
cleave
nucleic
(3)
Aminotransferase
NH₂
transfer
(1)
Helicase
unwind
dsDNA
(2)
Metalloprotease
metal
cleave
(2)
Ser/Thr kinase
phospho
Ser/Thr
(2)
Glycosidase
sugar
cleave
(1)
Binding & Interaction
ⓘ
ATP-binding
energy
nucleotide
(12)
Nucleotide-binding
nucleotide
(13)
Metal-binding
cofactor
ion
(18)
DNA-binding
nucleic
gene
(8)
RNA-binding
nucleic
(4)
GTP-binding
signal
nucleotide
(2)
Receptor
signal
surface
(3)
Biological Process
ⓘ
Transport
cargo
(16)
Transcription
DNA→RNA
(6)
Transcription reg.
gene
control
(5)
Apoptosis
death
(1)
Cell cycle
growth
division
(5)
Cell division
mitosis
(5)
Ion transport
ion
channel
(3)
Protein transport
sorting
(1)
Chaperone
fold
assist
(2)
Repressor
gene
suppress
(1)
Activator
gene
enhance
(1)
Stress response
stress
protect
(1)
Carb. metabolism
sugar
energy
(2)
Lipid metabolism
fat
energy
(1)
Structure
ⓘ
Experimental Structure
Any
Available (51)
Not Available
Structural Features
3D structure
PDB
crystal
(51)
Transmembrane
membrane
span
(15)
Disulfide bond
S–S
stability
(21)
Signal peptide
N-term
target
(19)
Coiled coil
α-helix
motif
(3)
Membrane
bilayer
(21)
Zinc-finger
Zn²⁺
motif
(1)
Repeat
domain
tandem
(16)
Ig domain
fold
antibody
(2)
EGF-like
growth
domain
(8)
Cellular Location
ⓘ
Cytoplasm
intracellular
(26)
Membrane
bilayer
(21)
Nucleus
intracellular
(10)
Cell membrane
surface
plasma
(16)
Secreted
extracellular
(12)
Mitochondrion
organelle
energy
(3)
ER
organelle
fold
(4)
Chloroplast
organelle
photo
(4)
Golgi
organelle
sort
(1)
Plastid
organelle
plant
(4)
Inner membrane
bilayer
inner
(7)
Properties & Composition
ⓘ
Sequence Length
—
Range: 95 — 5,635
Molecular Mass (Da)
—
Range: 10,970 — 613,390 Da
Subsequence Search
Find proteins containing this amino acid pattern
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Catalog Proteins
Page 3 of 4 (88 total)
Accession ▼
Name
Organism
Length
Features
□
P10493
Nidogen-1
Mus musculus
1,245
117
□
P10486
Type I restriction enzyme EcoR124I/EcoR124II ...
Escherichia coli
1,038
121
□
P10484
Type I restriction enzyme EcoR124I/EcoR124II ...
Escherichia coli
520
9
□
P0DSP4
Cyclic AMP-AMP-GMP synthase
Enterobacter hormaechei s...
381
87
□
P0AFF6
Transcription termination/antitermination pro...
Escherichia coli (strain ...
495
76
□
P0A8V2
DNA-directed RNA polymerase subunit beta
Escherichia coli (strain ...
1,342
194
□
P08957
Type I restriction enzyme EcoKI methylase sub...
Escherichia coli (strain ...
529
46
□
P08956
Type I restriction enzyme EcoKI endonuclease ...
Escherichia coli (strain ...
1,170
8
□
P06971
Ferrichrome outer membrane transporter/phage ...
Escherichia coli (strain ...
747
127
□
P05041
Aminodeoxychorismate synthase component 1
Escherichia coli (strain ...
453
60
□
P04993
RecBCD enzyme subunit RecD
Escherichia coli (strain ...
608
80
□
P04982
D-ribose pyranase
Escherichia coli (strain ...
139
7
□
P04805
Glutamate--tRNA ligase
Escherichia coli (strain ...
471
65
□
P04395
DNA-3-methyladenine glycosylase 2
Escherichia coli (strain ...
282
36
□
P03959
Potassium-transporting ATPase potassium-bindi...
Escherichia coli (strain ...
557
67
□
P03023
Lactose operon repressor
Escherichia coli (strain ...
360
45
□
P02929
Protein TonB
Escherichia coli (strain ...
239
40
□
P02925
Ribose import binding protein RbsB
Escherichia coli (strain ...
296
28
□
P02916
Maltose/maltodextrin transport system permeas...
Escherichia coli (strain ...
514
81
□
P02359
Small ribosomal subunit protein uS7
Escherichia coli (strain ...
179
26
□
P00968
Carbamoyl phosphate synthase large chain
Escherichia coli (strain ...
1,073
149
□
P00946
Mannose-6-phosphate isomerase
Escherichia coli (strain ...
391
7
□
P00861
Diaminopimelate decarboxylase
Escherichia coli (strain ...
420
61
□
P00804
Lipoprotein signal peptidase
Escherichia coli (strain ...
164
12
□
P00803
Signal peptidase I
Escherichia coli (strain ...
324
63
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